Background: Methotrexate (MTX) is the most widely used disease-modifying
anti-rheumatic drug in the treatment of juvenile idiopathic arthritis (JIA); however,
there is a variation in the clinical response to MTX among the patients [1]. Previous
studies have shown conflicting results regarding predictors of the response to
MTX. No unequivocal predictive SNP has been found yet, because many were
assessed in only one study, or were predictive in one study and showed no effect
in others [2].
Objectives: The aim of the study was to assess whether the PADI4 rs2240336
gene polymorphism is a predictor of the disease severity and the response to
MTX in patients with JIA from Bashkortostan, Russia.
Methods: 283 patients with JIA were genotyped for the PADI4 rs2240336 gene
polymorphism using real-time PCR. The statistical analysis was performed using
two-tailed Fisher’s exact test, odds ratio, 95% confidence interval and logistic
regression in Microsoft Excel, WinPepi v.11.44, R v.3.2.0, SNPStats programs.
The disease course was assessed as more severe if the MTX therapy was
required. The response to MTX was considered as good if clinical remission on
medication (Wallace) was achieved, otherwise – as insufficient. An addition of
a biological agent to the MTX therapy was also assessed as a marker of an
insufficient response.
Results: The requirement of the MTX treatment and its absence was noted at 261
(92.3%) and 22 (7.8%) children with JIA respectively, and the distribution of the
genotypes and alleles of the PADI4 rs2240336 gene polymorphism were similar
in both groups (p=0.982). At the same time the frequency of the genotype AG was
significantly higher (59.8% vs. 35.5%, p=0.0029, OR=2.71, 95% CI 1.41–4.94),
and the frequency of the genotype GG was significantly lower (23.8% vs. 45.2%,
p=0.0041, OR=0.38, 95% CI 0.20–0.73) in patients, who received MTX and not
achieved clinical remission on medication (n=122) than in those who achieved
(n=62). The best model of inheritance was overdominant, where the genotype AG
marked an insufficient response to MTX (AG vs. GG + AA, p=0.0017, OR=2.71,
95% CI 1.44–5.11). The association with an insufficient response to MTX was
also observed under the dominant (AG + AA vs. GG, p=0.0034, OR=2.64,
95% CI 1.38–5.06) and codominant (AG vs. GG, p=0.0041, OR=3.20, 95% CI
1.58–6.48) models of inheritance. Moreover, the genotype AG frequency was
significantly elevated in patients who required an addition of a biological agent
to the MTX therapy (n=73) (p=0.012, OR=2.097, 95% CI 1.20–3.66) and the
overdominant model of inheritance also proved the best (p=0.0088, OR=2.10,
95% CI 1.20–3.68).